generation - MSM generation tools (msmtools.generation)

This module contains function to generate simple MSMs.

Metropolis-Hastings chain

transition_matrix_metropolis_1d(E[, d]) Transition matrix describing the Metropolis chain jumping between neighbors in a discrete 1D energy landscape.
generate_traj(P, N[, start, stop, dt]) Generates a realization of the Markov chain with transition matrix P.